PET mean

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Defined in file : brainvisa/toolboxes/nuclearimaging/types/nuclearImaging.py

Used in the following processes

Complete PET acquisition data
Hoffman - Compute Coregistration and QC
Hoffman - Coregistration
Hoffman - QC Interface
Import Ecat PET Dynamic & T1MRI
Import PET mean
Import T1MRI (nifti) about PET subject
Intensity normalisation PET Pipeline (spm12)
Intensity normalisation PET Pipeline (spm8)
Optimal PET Amyloid Long (OPAL spm12)
Pet long QC comparison SUV
pet pipeline using MRI (spm12)
pet pipeline using MRI (spm8)
pet pipeline without MRI (spm12)
pet pipeline without MRI (spm8)
Preprocess for PET Pipeline using MRI (spm12)
Preprocess for PET Pipeline using MRI (spm8)
PVC pipeline
QC rawdata PET
Quality control for Pet with MRI Pipeline
Quality control for Pet without MRI Pipeline
SUV Calculation
Thalamus and white matter to PET native space
Thalamus/white matter statistics in PET space

Associated formats

BrainVISA volume formats
GIS image
gz compressed NIFTI-1 image
NIFTI-1 image

Associated ontology rules

  • brainvisa-3.2.0 :
  • {center}/{subject}/pet/{acquisition}/{tracer}/<subject>_mean
    {center}/{subject}/pet/{acquisition}/{tracer}/<subject>_mean_{first_frame}_to_{last_frame}
    {center}/{subject}/nuclear_imaging/{processing}/{acquisition}/pet{tracer}/{analysis}_from_{segmentation_method}_using_{PVC_method}_PVC/pet<tracer>_space/<subject>_pet_mean
    {center}/{subject}/nuclear_imaging/{processing}/{acquisition}/pet{tracer}/{analysis}_from_{segmentation_method}_using_{PVC_method}_PVC/pet<tracer>_space/<subject>_pet_mean_{PVC_method}_PVC
    {center}/{subject}/nuclear_imaging/{processing}/{acquisition}/pet{tracer}/{analysis}_from_{segmentation_method}_using_{PVC_method}_PVC/t1mri_space/<subject>_pet_mean
    {center}/{subject}/nuclear_imaging/{processing}/{acquisition}/pet{tracer}/{analysis}_from_{segmentation_method}_using_{PVC_method}_PVC/mni{template}_space/<subject>_pet_mean
    {center}/{subject}/nuclear_imaging/{processing}/{acquisition}/pet{tracer}/{analysis}_from_{segmentation_method}_without_PVC/pet<tracer>_space/<subject>_pet_mean
    {center}/{subject}/nuclear_imaging/{processing}/{acquisition}/pet{tracer}/{analysis}_from_{segmentation_method}_without_PVC/t1mri_space/<subject>_pet_mean
    {center}/{subject}/nuclear_imaging/{processing}/{acquisition}/pet{tracer}/{analysis}_from_{segmentation_method}_without_PVC/mni{template}_space/<subject>_pet_mean
    {center}/{subject}/nuclear_imaging/{processing}/{acquisition}/pet{tracer}/{analysis}/mni{template}_space/<subject>_pet_mean
    {center}/{subject}/nuclear_imaging/{processing}/{acquisition}/pet{tracer}/{analysis}/t1mri_space/<subject>_pet_mean

    Key attributes

  • brainvisa-3.2.0 :
  • center ,  subject ,  acquisition ,  tracer ,  processing ,  analysis ,  segmentation_method ,  PVC_method ,  space ,  template ,  first_frame ,  last_frame